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Includes topics such as: Gene Expression and Representation, Sequencing, Computational Biology and Medical Applications.

Table of Contents

• Session: Gene Expression and Representation, Microarray, Sequencing, Alignment, and Related Bioinformatics Issues
• 1) Investigating the Stability of Housekeeping Genes Using Microarray Datasets
• 2) A Comparative Analysis of Computational Indel Calling Pipelines for Next Generation Sequencing Data
• 3) Relevance of Information in Cell Signaling Pathways Using Default Logic
• 4) A Hybrid Clustering Algorithm and Functional Study of Gene Expression in Lung Adenocarcinoma
• 5) Gene Collector V1.1: A User-friendly Bilingual Gene Data Mining Software
• 6) An Algorithmic and Computational Approach to Open Reading Frames in Short dsdna Sequences: Evaluation of Carr's 'Conjecture'
• 7) Gene Expression Profile Classification in Random Feature Space
• 8) Grid Computing-Based Sequence Alignment
• Session: Computational Biology and Medical Applications + Health Informatics and Related Issues
• 1) Intentionally-Linked Entities: A Database System for Health Care Informatics
• 2) Determining Biological Trends Using Machine Learning Techniques
• 3) A Histogramming Neural-Net Image Classifier of Some Triatomin Vectors of Chagas Disease
• 4) Model of Diagnosis Knowledge Base Ontology Framework based on Clinical Practice Guidelines
• 5) An Image-Euclidean-Distance Classifier of Some Triatomine Vectors of Chagas Disease
• 6) Blood Vessel Detection in Images from Laser-Heated Skin
• 7) Proposal of Smart Blood Banks Central Distribution System in Saudi Arabia
• 8) Predicting the Co-receptors (CCR5 and CXCR4) of the Viruses R5, X4 and R5X4 that Cause AIDS (HIV-1) in Cells CD4 Using The Bayes Classifier
• 9) Biomechanical Evaluation for Fibular Allograft Combined with Impaction Bone Grafting in Treating the Femoral Head Necrosis: Thorough Debridement or Not?
• 10) Keratoconus Disease and Three-Dimensional Simulation of the Cornea throughout the Process of Cross-Linking Treatment
• 11) A Bayesian Network Classilfier of some Triatomine Vectors of Chagas Disease
• 12) Treatment Ontology Framework of Clinical Practice Guidelines
• Session: Protein Classification and Structure Prediction, Folding, and Computational Structural Biology + Drug Design
• 1) An Efficient Algorithm for Protein-Protein Interaction Network Analysis to Discover Overlapping Functional Modules
• 2) Dynamic Protein-protein Interaction Networks and the Detection of Protein Complexes: An Overview
• 3) Erythritol Promotes Interfacial Stability of GAPDH
• 4) Computational Methods for Protein-Protein Interaction Prediction
• Session: Machine Learning, Data and Information Mining + Signal Processing and Data Quality Enhancement + Databases
• 1) BIOBase: An Adaptable Biometric Tool & Database
• 2) Prediction and Rule Extraction of Major Histocompatibility Complex Class II Epitopes by Logic Minimization
• 3) Automatic EEG Bad Epoch and Artifact Removal Using Clustering
• 4) A Master-Slave MPI Approach for NGS Data Mining
• 5) Using Composite Digital Data to Improve the Interpretation of Analog Displays
• 6) BRATUMASS Source Separation: Multi-fractal Analysis for Near-field Microwave Signal Feature
• 7) Optimal Scaling Values for Time-frequency Distributions in Doppler Ultrasound Blood Flow Measurement
• Session: Posters
• 1) KBase: An Integrated Knowledgebase for Predictive Biology and Environmental Research
• 2) Complex Networks Associated with Positive Selection and Drug Resistance in the Malaria Parasite
• 3) Real-time Photoacoustic Tomography using Linear Array Transducer and Its Phantom Evaluation
• 4) An Interactive Visualization Tool to Interpret Transcriptomics Data
• 5) A Study of the Integration of Biomedical Devices with Information Technology Systems with an emphasis on Information Quality–
• Session: Late Breaking Papers And Position Papers: Bioinformatics And Computational Biology
• 1) Invited talk: Integrative Systems Biology Approaches to Identify Disrupted Pathways in Disease Development
• 2) SMIR: A Method to Predict the Residues Involved in the Core of a Protein
• 3) WMS4HPC, a Workflow Management System Bridge for High Performance Computing in Life Science Data Management
• 4) Wavelet Packet Based Diagnosis of Sleep Apnea using ECG Data
• 5) Biophotonic Algorithm of DNA Biophotonic Language of DNA
• 6) Bioinformatic Structure and Biophotonic Algorithm of the Brain
• 7) Review of Research on Biological Literature Text Mining
• 8) SBMLChecker, a Semantic Approach for SBML Model Reliability Evaluation
• 9) Biological System Analysis Using Integrated Bioinformatics Tools: Levels of the Central Dogma in Folate Mediate One-Carbon Metabolism (FOCM)

About the Author

Hamid R. Arabnia is Professor, Computer Science; Editor-in-Chief, The Journal of Supercomputing (Springer); Elected Fellow, Int'l Society of Intelligent Biological Medicine (ISIBM); The University of Georgia, Department of Computer Science.